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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56104850_56111282_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56104850 - 56111282

Intron Length:

6433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCATTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TCCCATTTAACA

Flanking Amino Acid:

ELQRHNKNLKEETIQRAREE

Intron Amino Acid Position:

228

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.7

26.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

73.1

0.52

0.9

68.5

35.8

Minor 5ss

29.9

-2.3

3.2

41.3

45.2

Minor BPS

59.5

0.29

1.5

65.36

41.2

Associated Gene:

Gene:

TXLNB

Ensembl Gene ID:

ENSAPLG00000003963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047089

56097164 - 56125560

28397

ENSAPLT00000004082

56097164 - 56125560

28397