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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56179627_56184287_R

Intron Information:

Intron Rank:

139392

Intron Class:

major

Intron Phase:

Intron Coordinates:

56179627 - 56184287

Intron Length:

4661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGACAT

5'SS Class:

major

3'SS Sequence:

CTTCTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

TTCCTCTGGAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.3

71.6

40.1

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

89.1

0.88

0.6

84.3

23.6

Minor 5ss

-2.4

39.3

45.9

Minor BPS

48.6

-0

1.8

68.72

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022465

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029269

56178940 - 56184390

5451