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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56237018_56243952_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56237018 - 56243952

Intron Length:

6935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTTTATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

TTTGTTTTATTA

Flanking Amino Acid:

VQQRTSTDQQESTSPVVSPQ

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.9

82.6

24.7

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

81.1

0.7

0.9

82.3

34.1

Minor 5ss

38.9

-1.3

2.9

47.2

Minor BPS

57.3

0.23

1.6

69.82

37.7

Associated Gene:

Gene:

REPS1

Ensembl Gene ID:

ENSAPLG00000003179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023686

56215949 - 56280206

64258

ENSAPLT00000003333

56215949 - 56280206

64258

ENSAPLT00000039314

56215949 - 56280206

64258