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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56252167_56258959_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56252167 - 56258959

Intron Length:

6793

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

ATTTCTTTCATT

Flanking Amino Acid:

PKLIDLEDSTEVGEQTGEVG

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.6

40.1

Major BPS

87.6

0.93

0.9

89.3

Major PPT

87.7

0.85

0.7

85.6

27.4

Minor 5ss

33.2

-1.9

3.2

40.2

45.4

Minor BPS

69.2

0.69

1.7

85.82

34.8

Associated Gene:

Gene:

REPS1

Ensembl Gene ID:

ENSAPLG00000003179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039314

56215949 - 56280206

64258

ENSAPLT00000023686

56215949 - 56280206

64258

ENSAPLT00000003333

56215949 - 56280206

64258