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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56259082_56263512_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56259082 - 56263512

Intron Length:

4431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTGTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTTTCTCATCA

Flanking Amino Acid:

TWPELNQSSEQWETFSERSS

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.1

36.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

78.7

0.65

0.9

76.7

37.4

Minor 5ss

41.7

-0.9

2.9

58.2

46.1

Minor BPS

57.5

0.23

1.8

70.93

41.6

Associated Gene:

Gene:

REPS1

Ensembl Gene ID:

ENSAPLG00000003179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039314

56215949 - 56280206

64258

ENSAPLT00000003333

56215949 - 56280206

64258