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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56259082_56266547_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56259082 - 56266547

Intron Length:

7466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTTAGCATT

5'SS Class:

strong_major

3'SS Sequence:

ATCTACTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

ACTAGGTTAACA

Flanking Amino Acid:

TWPELNQSSEDTAIVHPVPI

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.1

36.1

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

72.3

0.5

0.9

65.4

35.3

Minor 5ss

41.7

-0.9

2.9

58.2

46.1

Minor BPS

-0.2

2.4

62.09

44.1

Associated Gene:

Gene:

REPS1

Ensembl Gene ID:

ENSAPLG00000003179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023686

56215949 - 56280206

64258