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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56263594_56266547_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56263594 - 56266547

Intron Length:

2954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTCAA

5'SS Class:

major

3'SS Sequence:

ATCTACTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAA

U12 Branch Point Sequence:

ACTAGGTTAACA

Flanking Amino Acid:

FDSNIAPADPDTAIVHPVPI

Intron Amino Acid Position:

448

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

67.5

39.4

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

72.3

0.5

0.9

65.4

35.3

Minor 5ss

36.4

-1.5

51.1

45.2

Minor BPS

-0.2

2.4

62.09

44.1

Associated Gene:

Gene:

REPS1

Ensembl Gene ID:

ENSAPLG00000003179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039314

56215949 - 56280206

64258

ENSAPLT00000003333

56215949 - 56280206

64258