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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56271562_56273799_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56271562 - 56273799

Intron Length:

2238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTCAGTAGA

5'SS Class:

major

3'SS Sequence:

TTATGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TGGCTCTAAAGT

Flanking Amino Acid:

EQIGSSVTRQRSHSGTSPDN

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.3

69.3

43.2

Major BPS

0.57

73.6

28.6

Major PPT

85.8

0.81

0.8

80.8

36.6

Minor 5ss

-2.2

2.5

35.1

40.7

Minor BPS

48.1

-0

65.34

45.2

Associated Gene:

Gene:

REPS1

Ensembl Gene ID:

ENSAPLG00000003179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039314

56215949 - 56280206

64258

ENSAPLT00000023686

56215949 - 56280206

64258

ENSAPLT00000003333

56215949 - 56280206

64258