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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56273919_56274656_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56273919 - 56274656

Intron Length:

738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAATACC

5'SS Class:

major

3'SS Sequence:

ATTCCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTCCTCTTACAG

Flanking Amino Acid:

DMNRSFSVTPGQQQAGVVAY

Intron Amino Acid Position:

575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.3

72.1

37.7

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

83.4

0.75

0.8

76.8

31.2

Minor 5ss

31.8

-2.1

2.6

38.4

39.2

Minor BPS

49.5

-0.1

1.8

57.38

44.1

Associated Gene:

Gene:

REPS1

Ensembl Gene ID:

ENSAPLG00000003179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039314

56215949 - 56280206

64258

ENSAPLT00000023686

56215949 - 56280206

64258

ENSAPLT00000003333

56215949 - 56280206

64258