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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56276194_56277016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56276194 - 56277016

Intron Length:

823

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGG

5'SS Class:

strong_major

3'SS Sequence:

AATATCCCTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATTTTCTAAATG

Flanking Amino Acid:

EIETHSEVLQVEKPSDSASS

Intron Amino Acid Position:

659

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

72.2

39.5

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

68.5

0.42

0.9

64.2

38.1

Minor 5ss

26.6

-2.7

31.5

42.8

Minor BPS

63.5

0.28

1.7

68.91

39.2

Associated Gene:

Gene:

REPS1

Ensembl Gene ID:

ENSAPLG00000003179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023686

56215949 - 56280206

64258

ENSAPLT00000003333

56215949 - 56280206

64258