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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56277113_56277645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56277113 - 56277645

Intron Length:

533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTATGCAAT

5'SS Class:

major

3'SS Sequence:

TTTTCCCCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAT

U12 Branch Point Sequence:

TTTCTGAGAATT

Flanking Amino Acid:

KSSANVPTSAGKGTTPLAPP

Intron Amino Acid Position:

691

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

70.9

40.7

Major BPS

0.82

0.8

24.9

Major PPT

88.3

0.86

0.6

Minor 5ss

47.6

-0.2

2.6

66.5

44.6

Minor BPS

44.5

-0.3

2.3

70.92

40.1

Associated Gene:

Gene:

REPS1

Ensembl Gene ID:

ENSAPLG00000003179

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023686

56215949 - 56280206

64258

ENSAPLT00000003333

56215949 - 56280206

64258