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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56288195_56289218_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

56288195 - 56289218

Intron Length:

1024

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TGTCTTGCTTCAG|C

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

TATTCCTTAATG

Flanking Amino Acid:

LSDLEELNSSIQKLHLADAQ

Intron Amino Acid Position:

167

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

64.4

42.3

Major BPS

72.5

0.56

1.2

63.4

Major PPT

0.67

0.9

77.2

37.1

Minor 5ss

98.3

1.62

0.6

94.6

16.9

Minor BPS

83.9

0.93

1.1

80.78

34.7

Associated Gene:

Gene:

CCDC28A

Ensembl Gene ID:

ENSAPLG00000027699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040217

56287686 - 56291576

3891