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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56291217_56291345_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56291217 - 56291345

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGGGG

5'SS Class:

major

3'SS Sequence:

TTAATTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTATTTAACT

Flanking Amino Acid:

QPAAQKPKLKRVIKEKAKPP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

81.9

0.72

0.9

73.9

41.3

Minor 5ss

27.5

-2.6

3.6

37.8

Minor BPS

82.8

1.11

1.3

27.3

Associated Gene:

Gene:

CCDC28A

Ensembl Gene ID:

ENSAPLG00000027699

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040217

56287686 - 56291576

3891

ENSAPLT00000017371

56285321 - 56291576

6256