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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56382240_56430660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56382240 - 56430660

Intron Length:

48421

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTTGC

5'SS Class:

major

3'SS Sequence:

TCTCTCTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAG

U12 Branch Point Sequence:

TAGCATTTAGTT

Flanking Amino Acid:

NWTYRSQHRKAVSNLDEESR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

69.2

38.5

Major BPS

52.4

0.06

1.5

42.8

Major PPT

85.8

0.81

0.7

80.7

24.4

Minor 5ss

40.6

-1

2.8

44.2

Minor BPS

48.1

-0

1.7

63.55

40.9

Associated Gene:

Gene:

NHSL1

Ensembl Gene ID:

ENSAPLG00000003036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034586

56382035 - 56476916

94882

ENSAPLT00000022543

56382035 - 56476916

94882