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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56454630_56459502_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56454630 - 56459502

Intron Length:

4873

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGCTTT

5'SS Class:

major

3'SS Sequence:

TACCATGTATTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

CTTGTTCTACCA

Flanking Amino Acid:

QTDVVPINVTGENFDRQASI

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

71.5

41.1

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

60.7

0.24

41.2

Minor 5ss

48.5

-0.1

3.2

69.4

43.7

Minor BPS

45.2

-0.3

58.44

42.1

Associated Gene:

Gene:

NHSL1

Ensembl Gene ID:

ENSAPLG00000003036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034586

56382035 - 56476916

94882

ENSAPLT00000003083

56428819 - 56476916

48098