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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56459635_56468670_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56459635 - 56468670

Intron Length:

9036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGGCTC

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGACTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTATTTTGACT

Flanking Amino Acid:

GIPDNIQKELAVGTGQSDFR

Intron Amino Acid Position:

223

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

77.1

0.61

0.9

67.6

Minor 5ss

41.4

-1

3.3

58.6

46.2

Minor BPS

0.81

1.2

87.15

31.9

Associated Gene:

Gene:

NHSL1

Ensembl Gene ID:

ENSAPLG00000003036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034586

56382035 - 56476916

94882

ENSAPLT00000003083

56428819 - 56476916

48098