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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56520639_56524372_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56520639 - 56524372

Intron Length:

3734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGCAT

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTTACCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTATAT

U12 Branch Point Sequence:

CTTGGTTTACCA

Flanking Amino Acid:

DKKPNGHTQRSIPFRTIVVS

Intron Amino Acid Position:

1704

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

39.3

Major BPS

70.4

0.51

67.1

39.4

Major PPT

61.4

0.26

1.2

60.5

44.3

Minor 5ss

31.8

-2.1

3.5

46.7

48.6

Minor BPS

47.5

-0.1

2.1

61.93

45.1

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003