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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56526827_56527447_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56526827 - 56527447

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAATC

5'SS Class:

strong_major

3'SS Sequence:

CCCATACTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TGTCCCATACTC

Flanking Amino Acid:

IISRVGCSCIRYVLVTAGPV

Intron Amino Acid Position:

1582

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

1.1

35.3

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

63.9

0.31

0.8

32.2

Minor 5ss

43.6

-0.7

2.9

43.6

Minor BPS

49.9

-0

1.9

65.78

39.6

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116