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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56531952_56533488_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56531952 - 56533488

Intron Length:

1537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TCTAATGTATTT

Flanking Amino Acid:

ALDYLRRCSQLLAKIYKMPL

Intron Amino Acid Position:

1394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

67.6

40.3

Major BPS

82.2

0.8

0.9

81.6

Major PPT

95.2

1.02

0.5

28.1

Minor 5ss

49.3

-0

2.5

64.8

46.5

Minor BPS

41.5

-0.5

2.2

60.79

43.6

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003

ENSAPLT00000045378

56518459 - 56599650

81192