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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56533587_56533869_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56533587 - 56533869

Intron Length:

283

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTGCCATCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAT

U12 Branch Point Sequence:

TCCCTCCCAATG

Flanking Amino Acid:

MCLMKFVKGLGEVDCKEMGD

Intron Amino Acid Position:

1361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

84.2

33.9

Major BPS

62.2

0.3

1.4

72.5

43.5

Major PPT

73.1

0.52

0.9

70.2

35.3

Minor 5ss

40.6

-1.1

51.6

45.1

Minor BPS

43.1

-0.6

1.8

41.7

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003

ENSAPLT00000045378

56518459 - 56599650

81192