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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56533993_56535017_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56533993 - 56535017

Intron Length:

1025

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

GTTATTTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

ATCTTGTTATTT

Flanking Amino Acid:

KEYLVGEYSMGKRQAPVFDV

Intron Amino Acid Position:

1320

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

76.1

39.5

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

78.5

0.64

0.9

72.6

37.6

Minor 5ss

34.5

-1.8

3.2

41.9

44.5

Minor BPS

-0

2.2

69.06

42.8

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116