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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56535163_56535887_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56535163 - 56535887

Intron Length:

725

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

ACTCTGTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAT

U12 Branch Point Sequence:

ATTCTTTCAACC

Flanking Amino Acid:

ELCDEDVQDQVVTSIGELVE

Intron Amino Acid Position:

1272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.8

73.6

Major BPS

78.7

0.71

1.2

71.7

44.6

Major PPT

76.2

0.59

0.9

69.4

36.2

Minor 5ss

23.2

-3.1

3.6

31.4

42.8

Minor BPS

60.3

0.3

1.5

70.17

34.8

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003