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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56536068_56537606_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56536068 - 56537606

Intron Length:

1539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGTG

5'SS Class:

strong_major

3'SS Sequence:

GTTCTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

AAGTCTTACACT

Flanking Amino Acid:

WSLVAPHLVEAACHKERHVS

Intron Amino Acid Position:

1212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.9

41.1

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

80.6

0.69

0.8

31.1

Minor 5ss

32.6

-2

3.7

46.1

49.1

Minor BPS

48.3

-0

2.1

66.88

44.2

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003

ENSAPLT00000045378

56518459 - 56599650

81192