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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56539240_56540663_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56539240 - 56540663

Intron Length:

1424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

AATTTTTCAATT

Flanking Amino Acid:

AVLTLSTQADRLFEDAVDKL

Intron Amino Acid Position:

1118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

83.8

0.76

0.8

79.2

32.9

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

61.9

0.45

1.4

75.25

35.6

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116