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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56540979_56541526_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56540979 - 56541526

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTCAGC

5'SS Class:

major

3'SS Sequence:

TGCTTGTTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTTTATCCATC

Flanking Amino Acid:

HNQDCWPHVFRVCEYISTLE

Intron Amino Acid Position:

1013

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.1

0.45

1.1

60.1

44.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

77.5

0.62

0.9

72.1

37.9

Minor 5ss

38.7

-1.3

3.1

52.7

Minor BPS

44.5

-0.4

2.1

60.07

39.3

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003