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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56543474_56543717_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56543474 - 56543717

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGAGC

5'SS Class:

major

3'SS Sequence:

TTTCTCACTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

CATTTCTCACTC

Flanking Amino Acid:

NRKTDDSVVAGVAFARYLLI

Intron Amino Acid Position:

854

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

62.4

42.1

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

83.1

0.75

0.8

74.8

34.7

Minor 5ss

38.8

-1.3

3.1

52.2

44.6

Minor BPS

48.6

-0.1

1.8

58.88

40.7

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116