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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56543826_56545701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56543826 - 56545701

Intron Length:

1876

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTCAGTACT

5'SS Class:

major

3'SS Sequence:

AATATTCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTTTTAATA

Flanking Amino Acid:

HSLPLITMLTDIDGLGSSAI

Intron Amino Acid Position:

818

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

77.1

37.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

67.7

0.4

1.1

62.8

43.2

Minor 5ss

33.9

-1.8

2.7

41.7

38.3

Minor BPS

76.4

0.82

79.24

30.7

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116