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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56545868_56546818_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56545868 - 56546818

Intron Length:

951

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

TGGTTGTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

GTTGTCTTACAT

Flanking Amino Acid:

KKPAQAPVLLKEFMKQVQSS

Intron Amino Acid Position:

763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.8

81.9

26.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

0.59

69.6

41.6

Minor 5ss

36.6

-1.5

45.9

43.7

Minor BPS

53.6

0.19

1.8

73.29

43.5

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116