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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56546986_56551703_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56546986 - 56551703

Intron Length:

4718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGCAAG

5'SS Class:

major

3'SS Sequence:

GTGTTTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TCTCTGTTAAAT

Flanking Amino Acid:

LQSFSSTFCSGMMHSPGFEG

Intron Amino Acid Position:

707

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.2

62.7

43.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

72.5

0.51

73.5

41.9

Minor 5ss

41.2

-1

2.5

48.6

47.3

Minor BPS

51.8

0.13

2.1

74.05

42.7

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116