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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56552615_56553324_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56552615 - 56553324

Intron Length:

710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTATGCCTT

5'SS Class:

weak_major

3'SS Sequence:

GTTTTAATTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTGTTTTAATT

Flanking Amino Acid:

KRKSHLDLLKLIMDGMTEAC

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.2

58.7

45.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.1

0.61

0.9

71.5

38.4

Minor 5ss

59.9

0.33

2.7

83.6

34.7

Minor BPS

0.64

1.3

78.3

39.3

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116