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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56553438_56554790_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56553438 - 56554790

Intron Length:

1353

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATAA

5'SS Class:

strong_major

3'SS Sequence:

TATTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTAAAT

U12 Branch Point Sequence:

TCTGCTTTATTT

Flanking Amino Acid:

RVEAIKIMKEILGSPRRLCD

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

73.9

32.9

Major BPS

0.5

1.1

76.9

32.8

Major PPT

88.2

0.86

0.7

85.7

28.5

Minor 5ss

35.9

-1.6

3.3

46.4

48.9

Minor BPS

59.4

0.37

1.7

74.81

43.2

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003