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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56557548_56560895_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56557548 - 56560895

Intron Length:

3348

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTGCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

GTGACATGAATG

Flanking Amino Acid:

VLCEKLQAVINDNRQLQLLY

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

80.3

27.7

Major BPS

76.9

0.67

1.2

31.9

Major PPT

81.1

0.7

0.9

76.4

37.7

Minor 5ss

39.1

-1.2

2.9

50.9

39.6

Minor BPS

46.9

-0.3

1.8

51.4

42.6

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003