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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56560975_56562004_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56560975 - 56562004

Intron Length:

1030

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTACC

5'SS Class:

major

3'SS Sequence:

GTCCTTTTTGGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

AATGCATGATCT

Flanking Amino Acid:

NDTLQKFKSQGTSAESLCDD

Intron Amino Acid Position:

196

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

71.5

38.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

62.8

0.29

1.7

72.1

37.9

Minor 5ss

48.6

-0.1

2.1

64.2

Minor BPS

-0.2

66.1

43.8

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045590

56509069 - 56562071

53003