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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56564862_56567397_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56564862 - 56567397

Intron Length:

2536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTTTTGCTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

CATTGGCTAACC

Flanking Amino Acid:

NGSSVLKIAELCFACHRAGS

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.1

1.06

0.7

83.7

29.5

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

79.4

0.66

0.9

73.9

36.8

Minor 5ss

-1.8

3.1

44.6

43.4

Minor BPS

43.4

-0.5

2.6

59.91

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116