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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56580842_56584750_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56580842 - 56584750

Intron Length:

3909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGATC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAA

U12 Branch Point Sequence:

CTGTCTTCAACC

Flanking Amino Acid:

LAQQALAGMQKLLSDERFVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

78.6

35.4

Major BPS

78.2

0.7

79.9

32.6

Major PPT

89.7

0.89

0.6

85.1

22.4

Minor 5ss

42.9

-0.8

3.1

59.7

45.1

Minor BPS

64.3

0.43

1.6

70.12

41.7

Associated Gene:

Gene:

ARFGEF3

Ensembl Gene ID:

ENSAPLG00000002724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002771

56518459 - 56600574

82116

ENSAPLT00000045378

56518459 - 56599650

81192

ENSAPLT00000028524

56518459 - 56600574

82116

ENSAPLT00000028117

56518459 - 56600574

82116