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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56639997_56653796_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56639997 - 56653796

Intron Length:

13800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTTTTTCTAATT

Flanking Amino Acid:

EWRCESLMGYAWGRAAAATY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

76.5

39.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

80.6

0.69

0.9

77.4

35.6

Minor 5ss

44.4

-0.6

2.9

42.6

Minor BPS

69.2

0.68

1.6

87.82

31.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002707

56639786 - 56654439

14654