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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56710548_56714224_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56710548 - 56714224

Intron Length:

3677

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

GTAAAATCAACG

Flanking Amino Acid:

VRKLVPLKTNGDGNCLMHAA

Intron Amino Acid Position:

163

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

62.4

0.31

32.1

Major PPT

93.6

0.98

0.6

92.3

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

43.4

-0.6

49.31

43.1

Associated Gene:

Gene:

TNFAIP3

Ensembl Gene ID:

ENSAPLG00000002302

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002387

56703822 - 56714711

10890