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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56862267_56890639_R

Intron Information:

Intron Rank:

130818

Intron Class:

major

Intron Phase:

Intron Coordinates:

56862267 - 56890639

Intron Length:

28373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

GTATTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

TGGTCAGGACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.2

35.1

Major BPS

68.9

0.47

59.2

39.1

Major PPT

86.7

0.82

0.8

84.8

35.6

Minor 5ss

29.8

-2.3

3.3

38.8

46.3

Minor BPS

40.8

-0.6

2.4

62.76

46.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045769

56861543 - 56894796

33254