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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56890773_56894022_R

Intron Information:

Intron Rank:

130816

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

56890773 - 56894022

Intron Length:

3250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAACA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTGAAATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

TTCTCCTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

76.8

31.6

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

57.1

0.16

56.1

37.8

Minor 5ss

33.1

-1.9

2.9

41.4

44.7

Minor BPS

71.9

0.77

1.5

86.48

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045769

56861543 - 56894796

33254

ENSAPLT00000021279

56861543 - 56894796

33254