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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56894179_56894438_R

Intron Information:

Intron Rank:

130817

Intron Class:

major

Intron Phase:

Intron Coordinates:

56894179 - 56894438

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TGTATTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

GTATTTTCAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

71.6

38.5

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

69.8

0.45

1.1

70.5

39.1

Minor 5ss

38.2

-1.3

3.4

56.2

Minor BPS

48.9

-0.2

1.7

54.28

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045769

56861543 - 56894796

33254

ENSAPLT00000021279

56861543 - 56894796

33254