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Intron Name: Anas_platyrhynchos_platyrhynchos_3_56954343_56955417_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

56954343 - 56955417

Intron Length:

1075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TATAACTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TTTGCTATAACT

Flanking Amino Acid:

CIQVPLEQTTSTEKMVIVCV

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

74.1

29.5

Major BPS

82.2

0.8

71.9

35.8

Major PPT

67.8

0.4

0.9

58.8

42.2

Minor 5ss

31.5

-2.1

3.4

38.4

40.9

Minor BPS

69.3

0.68

1.7

88.67

36.3

Associated Gene:

Gene:

IFNGR1

Ensembl Gene ID:

ENSAPLG00000002012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002058

56943490 - 56961787

18298