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Intron Name: Anas_platyrhynchos_platyrhynchos_3_57146980_57147854_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57146980 - 57147854

Intron Length:

875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTTGGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

ACTTCATTATTC

Flanking Amino Acid:

NLLLSYRDIQDYDSIVKLVK

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

27.8

Major BPS

78.6

0.71

79.6

32.9

Major PPT

70.4

0.46

1.1

74.5

Minor 5ss

46.4

-0.4

2.5

62.6

42.2

Minor BPS

54.4

0.12

1.9

65.76

40.1

Associated Gene:

Gene:

MAP3K5

Ensembl Gene ID:

ENSAPLG00000015796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016547

57135714 - 57204748

69035