Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_57184542_57185123_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57184542 - 57185123

Intron Length:

582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTGCTCTGAATG

Flanking Amino Acid:

DNQIVHRDIKGDNVLINTYS

Intron Amino Acid Position:

651

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.8

85.9

23.9

Major BPS

71.2

0.53

70.3

31.9

Major PPT

77.9

0.63

0.8

77.1

31.6

Minor 5ss

29.7

-2.3

39.4

46.1

Minor BPS

57.1

0.09

1.5

61.27

40.9

Associated Gene:

Gene:

MAP3K5

Ensembl Gene ID:

ENSAPLG00000015796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016547

57135714 - 57204748

69035