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Intron Name: Anas_platyrhynchos_platyrhynchos_3_57296424_57296850_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57296424 - 57296850

Intron Length:

427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGCCAA

5'SS Class:

strong_major

3'SS Sequence:

TGTGGTTACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTGAT

U12 Branch Point Sequence:

TTGTGGTTACAC

Flanking Amino Acid:

KTRSPAPSPVWHASKSLPSL

Intron Amino Acid Position:

280

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

66.8

40.3

Major BPS

73.5

0.58

1.2

63.4

44.3

Major PPT

67.7

0.4

61.2

43.9

Minor 5ss

37.3

-1.4

3.1

44.3

44.6

Minor BPS

42.1

-0.6

2.6

58.87

46.1

Associated Gene:

Gene:

MAP7

Ensembl Gene ID:

ENSAPLG00000012664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031731

57280575 - 57315541

34967

ENSAPLT00000013228

57262160 - 57315076

52917