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Intron Name: Anas_platyrhynchos_platyrhynchos_3_57297129_57300946_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57297129 - 57300946

Intron Length:

3818

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

CCATCTATTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

ATCCCATCTATT

Flanking Amino Acid:

EVAVHTEVGQAASPSLSPAP

Intron Amino Acid Position:

373

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

76.7

0.6

0.9

73.5

35.4

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

43.6

-0.4

61.42

Associated Gene:

Gene:

MAP7

Ensembl Gene ID:

ENSAPLG00000012664

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031731

57280575 - 57315541

34967

ENSAPLT00000013228

57262160 - 57315076

52917