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Intron Name: Anas_platyrhynchos_platyrhynchos_3_57319575_57320375_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57319575 - 57320375

Intron Length:

801

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATTAC

U12 Branch Point Sequence:

GCTTGCCTAACG

Flanking Amino Acid:

GISTFCRLQADPEFSLAFRK

Intron Amino Acid Position:

535

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

75.5

40.4

Major BPS

54.7

0.12

1.1

47.4

35.7

Major PPT

0.92

0.6

89.3

19.4

Minor 5ss

35.8

-1.6

3.2

51.3

45.1

Minor BPS

49.8

-0.1

2.2

60.76

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013056

57319453 - 57342625

23173