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Intron Name: Anas_platyrhynchos_platyrhynchos_3_57355286_57357327_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

57355286 - 57357327

Intron Length:

2042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATTA

5'SS Class:

strong_major

3'SS Sequence:

TCCATTTGGGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CCTCCCCTCACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.3

1.02

0.7

86.9

22.8

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

55.2

0.12

1.2

58.9

40.9

Minor 5ss

41.5

-0.9

3.1

48.2

Minor BPS

49.2

0.02

2.1

69.93

46.6

Associated Gene:

Gene:

BCLAF1

Ensembl Gene ID:

ENSAPLG00000007570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036660

57354035 - 57364648

10614

ENSAPLT00000033030

57354035 - 57374747

20713

ENSAPLT00000045788

57354035 - 57366273

12239