Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_57359231_57360653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57359231 - 57360653

Intron Length:

1423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTATCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCTAT

U12 Branch Point Sequence:

TCTTTGCTATCC

Flanking Amino Acid:

ETAKGGKFLKRYTDEESRVY

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

58.7

0.22

1.5

58.5

47.9

Major PPT

75.2

0.57

0.9

69.3

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

-0.4

2.4

62.03

43.7

Associated Gene:

Gene:

BCLAF1

Ensembl Gene ID:

ENSAPLG00000007570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033030

57354035 - 57374747

20713

ENSAPLT00000007869

57357328 - 57373187

15860

ENSAPLT00000045788

57354035 - 57366273

12239

ENSAPLT00000036660

57354035 - 57364648

10614