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Intron Name: Anas_platyrhynchos_platyrhynchos_3_57405320_57407678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57405320 - 57407678

Intron Length:

2359

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGTTCCTCACCT

Flanking Amino Acid:

QKDTIPSIQIGFMTYIVEPL

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

72.4

0.56

73.5

32.5

Major PPT

87.1

0.84

0.7

80.8

31.2

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

65.9

0.58

1.9

85.32

40.8

Associated Gene:

Gene:

PDE7B

Ensembl Gene ID:

ENSAPLG00000007602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038065

57404526 - 57577231

172706

ENSAPLT00000036599

57404526 - 57577231

172706

ENSAPLT00000007953

57404526 - 57485702

81177