Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_3_57869297_57870921_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

57869297 - 57870921

Intron Length:

1625

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACATATG

5'SS Class:

major

3'SS Sequence:

TTTAATGATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATG

Flanking Amino Acid:

LGKTRWTREEDEKLKKLVEQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

75.3

40.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

73.3

0.52

1.1

70.3

44.4

Minor 5ss

37.6

-1.4

3.1

50.7

45.8

Minor BPS

72.1

0.55

1.2

71.21

36.3

Associated Gene:

Gene:

MYB

Ensembl Gene ID:

ENSAPLG00000007728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042023

57847908 - 57878159

30252

ENSAPLT00000008072

57847908 - 57878159

30252